Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
U2af1Q9D883 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
U2af1Q9D883 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
U2af1Q9D883 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
U2af1Q9D883 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
U2af1Q9D883 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
U2af1Q9D883 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
U2af1Q9D883 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
U2af1Q9D883 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
U2af1Q9D883 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
U2af1Q9D883 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
U2af1Q9D883 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
U2af1Q9D883 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
U2af1Q9D883 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
U2af1Q9D883 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
U2af1Q9D883 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
U2af1Q9D883 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
U2af1Q9D883 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
U2af1Q9D883 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC22.12■■□□□ 1.13
U2af1Q9D883 Gm29518-201ENSMUST00000190858 372 ntBASIC22.12■■□□□ 1.13
U2af1Q9D883 Gm33142-201ENSMUST00000193913 867 ntBASIC22.12■■□□□ 1.13
U2af1Q9D883 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
U2af1Q9D883 AC122351.1-201ENSMUST00000220467 126 ntBASIC22.12■■□□□ 1.13
U2af1Q9D883 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
U2af1Q9D883 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
U2af1Q9D883 Gm6598-201ENSMUST00000202719 2615 ntBASIC22.11■■□□□ 1.13
U2af1Q9D883 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
U2af1Q9D883 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
U2af1Q9D883 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
U2af1Q9D883 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
U2af1Q9D883 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
U2af1Q9D883 Gm11620-201ENSMUST00000118770 1845 ntBASIC22.11■■□□□ 1.13
U2af1Q9D883 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC22.11■■□□□ 1.13
U2af1Q9D883 Mir770-201ENSMUST00000103252 94 ntBASIC22.11■■□□□ 1.13
U2af1Q9D883 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
U2af1Q9D883 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
U2af1Q9D883 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
U2af1Q9D883 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC22.11■■□□□ 1.13
U2af1Q9D883 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
U2af1Q9D883 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
U2af1Q9D883 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
U2af1Q9D883 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
U2af1Q9D883 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
U2af1Q9D883 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
U2af1Q9D883 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
U2af1Q9D883 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
U2af1Q9D883 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
U2af1Q9D883 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
U2af1Q9D883 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
U2af1Q9D883 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
U2af1Q9D883 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
U2af1Q9D883 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
U2af1Q9D883 Gm17808-201ENSMUST00000200859 894 ntBASIC22.1■■□□□ 1.13
U2af1Q9D883 Gm43294-201ENSMUST00000202850 2490 ntBASIC22.1■■□□□ 1.13
U2af1Q9D883 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC22.1■■□□□ 1.13
U2af1Q9D883 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
U2af1Q9D883 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
U2af1Q9D883 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
U2af1Q9D883 Gm45203-201ENSMUST00000206384 1831 ntBASIC22.1■■□□□ 1.13
U2af1Q9D883 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
U2af1Q9D883 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
U2af1Q9D883 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
U2af1Q9D883 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
U2af1Q9D883 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
U2af1Q9D883 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
U2af1Q9D883 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
U2af1Q9D883 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
U2af1Q9D883 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC22.09■■□□□ 1.13
U2af1Q9D883 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
U2af1Q9D883 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
U2af1Q9D883 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
U2af1Q9D883 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
U2af1Q9D883 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC22.09■■□□□ 1.13
U2af1Q9D883 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC22.09■■□□□ 1.13
U2af1Q9D883 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
U2af1Q9D883 Cxcl14-202ENSMUST00000224801 1467 ntBASIC22.09■■□□□ 1.13
U2af1Q9D883 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
U2af1Q9D883 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
U2af1Q9D883 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC22.08■■□□□ 1.13
U2af1Q9D883 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
U2af1Q9D883 Gm21362-201ENSMUST00000194272 928 ntBASIC22.08■■□□□ 1.13
U2af1Q9D883 Gm18115-201ENSMUST00000221209 621 ntBASIC22.08■■□□□ 1.13
U2af1Q9D883 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC22.08■■□□□ 1.13
U2af1Q9D883 AC154471.1-201ENSMUST00000224418 436 ntBASIC22.08■■□□□ 1.13
U2af1Q9D883 Gm7367-201ENSMUST00000057611 492 ntBASIC22.08■■□□□ 1.13
U2af1Q9D883 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
U2af1Q9D883 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
U2af1Q9D883 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
U2af1Q9D883 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
U2af1Q9D883 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
U2af1Q9D883 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
U2af1Q9D883 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
U2af1Q9D883 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
U2af1Q9D883 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
U2af1Q9D883 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
U2af1Q9D883 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC22.07■■□□□ 1.12
U2af1Q9D883 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC22.07■■□□□ 1.12
U2af1Q9D883 Gm6623-201ENSMUST00000173570 544 ntBASIC22.07■■□□□ 1.12
U2af1Q9D883 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC22.07■■□□□ 1.12
U2af1Q9D883 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms