Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chmp5Q9D7S9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chmp5Q9D7S9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Chmp5Q9D7S9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chmp5Q9D7S9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chmp5Q9D7S9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC21.08■□□□□ 0.96
Chmp5Q9D7S9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chmp5Q9D7S9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Chmp5Q9D7S9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chmp5Q9D7S9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp5Q9D7S9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp5Q9D7S9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC21.06■□□□□ 0.96
Chmp5Q9D7S9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp5Q9D7S9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp5Q9D7S9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp5Q9D7S9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp5Q9D7S9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp5Q9D7S9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.06■□□□□ 0.96
Chmp5Q9D7S9 Gm37292-201ENSMUST00000192062 758 ntBASIC21.06■□□□□ 0.96
Chmp5Q9D7S9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp5Q9D7S9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.06■□□□□ 0.96
Chmp5Q9D7S9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp5Q9D7S9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp5Q9D7S9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC21.06■□□□□ 0.96
Chmp5Q9D7S9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Chmp5Q9D7S9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp5Q9D7S9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Chmp5Q9D7S9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp5Q9D7S9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Chmp5Q9D7S9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp5Q9D7S9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp5Q9D7S9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp5Q9D7S9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Chmp5Q9D7S9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp5Q9D7S9 Gm10517-202ENSMUST00000192970 758 ntBASIC21.05■□□□□ 0.96
Chmp5Q9D7S9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.05■□□□□ 0.96
Chmp5Q9D7S9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp5Q9D7S9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Chmp5Q9D7S9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chmp5Q9D7S9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp5Q9D7S9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp5Q9D7S9 Gm24841-201ENSMUST00000158676 357 ntBASIC21.04■□□□□ 0.96
Chmp5Q9D7S9 AC107711.5-202ENSMUST00000226429 702 ntBASIC21.04■□□□□ 0.96
Chmp5Q9D7S9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp5Q9D7S9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp5Q9D7S9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp5Q9D7S9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.04■□□□□ 0.96
Chmp5Q9D7S9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp5Q9D7S9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp5Q9D7S9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC21.04■□□□□ 0.96
Chmp5Q9D7S9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Chmp5Q9D7S9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp5Q9D7S9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Chmp5Q9D7S9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp5Q9D7S9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Chmp5Q9D7S9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp5Q9D7S9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.03■□□□□ 0.96
Chmp5Q9D7S9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp5Q9D7S9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp5Q9D7S9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp5Q9D7S9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Chmp5Q9D7S9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp5Q9D7S9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp5Q9D7S9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp5Q9D7S9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp5Q9D7S9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Chmp5Q9D7S9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chmp5Q9D7S9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC21.03■□□□□ 0.96
Chmp5Q9D7S9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Chmp5Q9D7S9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp5Q9D7S9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Chmp5Q9D7S9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp5Q9D7S9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp5Q9D7S9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC21.02■□□□□ 0.96
Chmp5Q9D7S9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp5Q9D7S9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp5Q9D7S9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp5Q9D7S9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp5Q9D7S9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp5Q9D7S9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms