Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ShpkQ9D5J6 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.13□□□□□ -0.15
ShpkQ9D5J6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ShpkQ9D5J6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ShpkQ9D5J6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ShpkQ9D5J6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.13□□□□□ -0.15
ShpkQ9D5J6 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.13□□□□□ -0.15
ShpkQ9D5J6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
ShpkQ9D5J6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
ShpkQ9D5J6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ShpkQ9D5J6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ShpkQ9D5J6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ShpkQ9D5J6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ShpkQ9D5J6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Gm13146-201ENSMUST00000118508 780 ntBASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Gm43060-201ENSMUST00000200621 289 ntBASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ShpkQ9D5J6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ShpkQ9D5J6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ShpkQ9D5J6 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.09□□□□□ -0.15
ShpkQ9D5J6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ShpkQ9D5J6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.09□□□□□ -0.15
ShpkQ9D5J6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ShpkQ9D5J6 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.09□□□□□ -0.15
ShpkQ9D5J6 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ShpkQ9D5J6 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
ShpkQ9D5J6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ShpkQ9D5J6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ShpkQ9D5J6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ShpkQ9D5J6 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ShpkQ9D5J6 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ShpkQ9D5J6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ShpkQ9D5J6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ShpkQ9D5J6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
ShpkQ9D5J6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.09□□□□□ -0.15
ShpkQ9D5J6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ShpkQ9D5J6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms