Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Gm13401-201ENSMUST00000117074 291 ntBASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Gm10493-201ENSMUST00000097270 612 ntBASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim42Q9D2H5 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.8■□□□□ 0.28
Trim42Q9D2H5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.8■□□□□ 0.28
Trim42Q9D2H5 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.8■□□□□ 0.28
Trim42Q9D2H5 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.8■□□□□ 0.28
Trim42Q9D2H5 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim42Q9D2H5 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Gm11643-201ENSMUST00000119578 864 ntBASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim42Q9D2H5 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Trim42Q9D2H5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms