Protein–RNA interactions for Protein: Q9CYR0

Ssbp1, Single-stranded DNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1Q9CYR0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp1Q9CYR0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp1Q9CYR0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp1Q9CYR0 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp1Q9CYR0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssbp1Q9CYR0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Gm5921-201ENSMUST00000075898 882 ntBASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ssbp1Q9CYR0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ssbp1Q9CYR0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssbp1Q9CYR0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ssbp1Q9CYR0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ssbp1Q9CYR0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp1Q9CYR0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp1Q9CYR0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp1Q9CYR0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp1Q9CYR0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp1Q9CYR0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp1Q9CYR0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp1Q9CYR0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.33□□□□□ -0.44
Ssbp1Q9CYR0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp1Q9CYR0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.33□□□□□ -0.44
Ssbp1Q9CYR0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp1Q9CYR0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp1Q9CYR0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ssbp1Q9CYR0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC12.33□□□□□ -0.44
Ssbp1Q9CYR0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp1Q9CYR0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp1Q9CYR0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Ssbp1Q9CYR0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssbp1Q9CYR0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms