Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim13Q9CYB0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim13Q9CYB0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trim13Q9CYB0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim13Q9CYB0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim13Q9CYB0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim13Q9CYB0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim13Q9CYB0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.58■□□□□ 0.08
Trim13Q9CYB0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim13Q9CYB0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trim13Q9CYB0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim13Q9CYB0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim13Q9CYB0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim13Q9CYB0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trim13Q9CYB0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim13Q9CYB0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim13Q9CYB0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim13Q9CYB0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim13Q9CYB0 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.57■□□□□ 0.08
Trim13Q9CYB0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim13Q9CYB0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim13Q9CYB0 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Gm11927-201ENSMUST00000118472 759 ntBASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim13Q9CYB0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Gm11643-201ENSMUST00000119578 864 ntBASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim13Q9CYB0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim13Q9CYB0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim13Q9CYB0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim13Q9CYB0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Trim13Q9CYB0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim13Q9CYB0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim13Q9CYB0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.54■□□□□ 0.08
Trim13Q9CYB0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim13Q9CYB0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trim13Q9CYB0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim13Q9CYB0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms