Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1lQ9CXF7 Gm18671-201ENSMUST00000214826 683 ntBASIC19.05■□□□□ 0.64
Chd1lQ9CXF7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1lQ9CXF7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1lQ9CXF7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.05■□□□□ 0.64
Chd1lQ9CXF7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Chd1lQ9CXF7 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1lQ9CXF7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1lQ9CXF7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1lQ9CXF7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1lQ9CXF7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1lQ9CXF7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1lQ9CXF7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1lQ9CXF7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chd1lQ9CXF7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Gm6576-201ENSMUST00000169678 883 ntBASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Gm45212-201ENSMUST00000205831 3403 ntBASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd1lQ9CXF7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.03■□□□□ 0.64
Chd1lQ9CXF7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1lQ9CXF7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1lQ9CXF7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1lQ9CXF7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1lQ9CXF7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.03■□□□□ 0.64
Chd1lQ9CXF7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.03■□□□□ 0.64
Chd1lQ9CXF7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.03■□□□□ 0.64
Chd1lQ9CXF7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.03■□□□□ 0.64
Chd1lQ9CXF7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1lQ9CXF7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Chd1lQ9CXF7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1lQ9CXF7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1lQ9CXF7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Chd1lQ9CXF7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1lQ9CXF7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd1lQ9CXF7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd1lQ9CXF7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd1lQ9CXF7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.02■□□□□ 0.64
Chd1lQ9CXF7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd1lQ9CXF7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd1lQ9CXF7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Chd1lQ9CXF7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Chd1lQ9CXF7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd1lQ9CXF7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd1lQ9CXF7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd1lQ9CXF7 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd1lQ9CXF7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Chd1lQ9CXF7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Chd1lQ9CXF7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd1lQ9CXF7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.02■□□□□ 0.64
Chd1lQ9CXF7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.02■□□□□ 0.63
Chd1lQ9CXF7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Chd1lQ9CXF7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chd1lQ9CXF7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1lQ9CXF7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1lQ9CXF7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1lQ9CXF7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1lQ9CXF7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1lQ9CXF7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1lQ9CXF7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1lQ9CXF7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1lQ9CXF7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1lQ9CXF7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1lQ9CXF7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1lQ9CXF7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1lQ9CXF7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd1lQ9CXF7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1lQ9CXF7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chd1lQ9CXF7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms