Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx47Q9CWX9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx47Q9CWX9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx47Q9CWX9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.35■□□□□ 0.37
Ddx47Q9CWX9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx47Q9CWX9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx47Q9CWX9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx47Q9CWX9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Gm11643-201ENSMUST00000119578 864 ntBASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ddx47Q9CWX9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx47Q9CWX9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx47Q9CWX9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx47Q9CWX9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Ddx47Q9CWX9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Ddx47Q9CWX9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.33■□□□□ 0.37
Ddx47Q9CWX9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ddx47Q9CWX9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx47Q9CWX9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Ddx47Q9CWX9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx47Q9CWX9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.33■□□□□ 0.36
Ddx47Q9CWX9 Gm44549-201ENSMUST00000208351 577 ntBASIC17.33■□□□□ 0.36
Ddx47Q9CWX9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx47Q9CWX9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx47Q9CWX9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx47Q9CWX9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx47Q9CWX9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx47Q9CWX9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx47Q9CWX9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ddx47Q9CWX9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx47Q9CWX9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
Ddx47Q9CWX9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx47Q9CWX9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx47Q9CWX9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ddx47Q9CWX9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Gm8495-201ENSMUST00000188740 694 ntBASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ddx47Q9CWX9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Mtag2-201ENSMUST00000058665 714 ntBASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.31■□□□□ 0.36
Ddx47Q9CWX9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms