Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldnd1Q9CQX5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldnd1Q9CQX5 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cldnd1Q9CQX5 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.21■□□□□ 0.35
Cldnd1Q9CQX5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Cldnd1Q9CQX5 Gm15173-201ENSMUST00000122049 433 ntBASIC17.21■□□□□ 0.35
Cldnd1Q9CQX5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.21■□□□□ 0.35
Cldnd1Q9CQX5 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.21■□□□□ 0.35
Cldnd1Q9CQX5 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldnd1Q9CQX5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldnd1Q9CQX5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldnd1Q9CQX5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldnd1Q9CQX5 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldnd1Q9CQX5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldnd1Q9CQX5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldnd1Q9CQX5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cldnd1Q9CQX5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cldnd1Q9CQX5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Grk6-206ENSMUST00000224995 2971 ntBASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cldnd1Q9CQX5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd1Q9CQX5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd1Q9CQX5 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd1Q9CQX5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd1Q9CQX5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd1Q9CQX5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd1Q9CQX5 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd1Q9CQX5 Gm25745-201ENSMUST00000174945 133 ntBASIC17.19■□□□□ 0.34
Cldnd1Q9CQX5 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.19■□□□□ 0.34
Cldnd1Q9CQX5 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.19■□□□□ 0.34
Cldnd1Q9CQX5 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd1Q9CQX5 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd1Q9CQX5 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd1Q9CQX5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd1Q9CQX5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd1Q9CQX5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd1Q9CQX5 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd1Q9CQX5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldnd1Q9CQX5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Gm23935-201ENSMUST00000102303 57 ntBASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Gm24270-201ENSMUST00000102326 57 ntBASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Gm25990-201ENSMUST00000102440 86 ntBASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Gm13418-201ENSMUST00000119097 944 ntBASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Gm24245-201ENSMUST00000157318 57 ntBASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cldnd1Q9CQX5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Gm7230-201ENSMUST00000173026 815 ntBASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Gm7063-201ENSMUST00000186840 981 ntBASIC17.17■□□□□ 0.34
Cldnd1Q9CQX5 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms