Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Gm7889-201ENSMUST00000185591 958 ntBASIC17.44■□□□□ 0.38
Q9CQC3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.44■□□□□ 0.38
Q9CQC3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CQC3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Q9CQC3 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.44■□□□□ 0.38
Q9CQC3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CQC3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CQC3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CQC3 Phf7-203ENSMUST00000226565 1971 ntBASIC17.44■□□□□ 0.38
Q9CQC3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CQC3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.44■□□□□ 0.38
Q9CQC3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CQC3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CQC3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Q9CQC3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CQC3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CQC3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CQC3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.43■□□□□ 0.38
Q9CQC3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Q9CQC3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.43■□□□□ 0.38
Q9CQC3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Q9CQC3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Q9CQC3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CQC3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Q9CQC3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CQC3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CQC3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CQC3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CQC3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CQC3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Q9CQC3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Q9CQC3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Q9CQC3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CQC3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CQC3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CQC3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Q9CQC3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Q9CQC3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CQC3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CQC3 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.42■□□□□ 0.38
Q9CQC3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CQC3 Gm7213-201ENSMUST00000215977 950 ntBASIC17.42■□□□□ 0.38
Q9CQC3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CQC3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Q9CQC3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CQC3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CQC3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.42■□□□□ 0.38
Q9CQC3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Q9CQC3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Q9CQC3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CQC3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CQC3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q9CQC3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CQC3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CQC3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Q9CQC3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Q9CQC3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CQC3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Q9CQC3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.41■□□□□ 0.38
Q9CQC3 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.41■□□□□ 0.38
Q9CQC3 Gm45058-201ENSMUST00000205810 766 ntBASIC17.41■□□□□ 0.38
Q9CQC3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.41■□□□□ 0.38
Q9CQC3 Gm18115-201ENSMUST00000221209 621 ntBASIC17.41■□□□□ 0.38
Q9CQC3 Gm10566-201ENSMUST00000086739 996 ntBASIC17.41■□□□□ 0.38
Q9CQC3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CQC3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Q9CQC3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CQC3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CQC3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CQC3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CQC3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q9CQC3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CQC3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CQC3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CQC3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Q9CQC3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CQC3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CQC3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CQC3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CQC3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.4■□□□□ 0.38
Q9CQC3 Mir5130-201ENSMUST00000175160 84 ntBASIC17.4■□□□□ 0.38
Q9CQC3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CQC3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Q9CQC3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CQC3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CQC3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Q9CQC3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Q9CQC3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Q9CQC3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Q9CQC3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Q9CQC3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CQC3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Q9CQC3 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.39■□□□□ 0.37
Q9CQC3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CQC3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CQC3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CQC3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.39■□□□□ 0.37
Q9CQC3 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Q9CQC3 Gm6433-201ENSMUST00000118634 875 ntBASIC17.39■□□□□ 0.37
Q9CQC3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms