Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raf1Q99N57 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Raf1Q99N57 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raf1Q99N57 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.1■□□□□ 0.01
Raf1Q99N57 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raf1Q99N57 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raf1Q99N57 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raf1Q99N57 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raf1Q99N57 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raf1Q99N57 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.09■□□□□ 0.01
Raf1Q99N57 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Raf1Q99N57 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.09■□□□□ 0.01
Raf1Q99N57 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Raf1Q99N57 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Raf1Q99N57 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Raf1Q99N57 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Raf1Q99N57 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.08■□□□□ 0.01
Raf1Q99N57 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Raf1Q99N57 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Raf1Q99N57 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Raf1Q99N57 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Raf1Q99N57 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.08■□□□□ 0
Raf1Q99N57 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Raf1Q99N57 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Raf1Q99N57 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Raf1Q99N57 Mir1199-201ENSMUST00000117015 119 ntBASIC15.08■□□□□ 0
Raf1Q99N57 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.08■□□□□ 0
Raf1Q99N57 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raf1Q99N57 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.08■□□□□ 0
Raf1Q99N57 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Raf1Q99N57 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Raf1Q99N57 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Raf1Q99N57 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Raf1Q99N57 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.08■□□□□ 0
Raf1Q99N57 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Raf1Q99N57 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Raf1Q99N57 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Raf1Q99N57 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Raf1Q99N57 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 Gm13401-201ENSMUST00000117074 291 ntBASIC15.07■□□□□ 0
Raf1Q99N57 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.07■□□□□ 0
Raf1Q99N57 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.07■□□□□ 0
Raf1Q99N57 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.07■□□□□ 0
Raf1Q99N57 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.07■□□□□ 0
Raf1Q99N57 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Raf1Q99N57 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Raf1Q99N57 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.07■□□□□ 0
Raf1Q99N57 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Raf1Q99N57 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Raf1Q99N57 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.06■□□□□ 0
Raf1Q99N57 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Raf1Q99N57 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.06■□□□□ 0
Raf1Q99N57 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.06■□□□□ 0
Raf1Q99N57 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raf1Q99N57 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.06■□□□□ 0
Raf1Q99N57 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Raf1Q99N57 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.06■□□□□ 0
Raf1Q99N57 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raf1Q99N57 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raf1Q99N57 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raf1Q99N57 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Raf1Q99N57 Gm13158-201ENSMUST00000122007 736 ntBASIC15.06■□□□□ 0
Raf1Q99N57 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms