Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.75■□□□□ 0.75
Hdac9Q99N13 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.75■□□□□ 0.75
Hdac9Q99N13 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Hdac9Q99N13 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac9Q99N13 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Hdac9Q99N13 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac9Q99N13 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac9Q99N13 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Hdac9Q99N13 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac9Q99N13 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Hdac9Q99N13 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac9Q99N13 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hdac9Q99N13 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.74■□□□□ 0.75
Hdac9Q99N13 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac9Q99N13 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac9Q99N13 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac9Q99N13 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.74■□□□□ 0.75
Hdac9Q99N13 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hdac9Q99N13 Gm2651-201ENSMUST00000203560 838 ntBASIC19.74■□□□□ 0.75
Hdac9Q99N13 Gm6376-201ENSMUST00000209407 580 ntBASIC19.74■□□□□ 0.75
Hdac9Q99N13 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Hdac9Q99N13 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.73■□□□□ 0.75
Hdac9Q99N13 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Hdac9Q99N13 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac9Q99N13 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac9Q99N13 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac9Q99N13 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac9Q99N13 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.73■□□□□ 0.75
Hdac9Q99N13 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.73■□□□□ 0.75
Hdac9Q99N13 Gm15165-201ENSMUST00000118140 502 ntBASIC19.73■□□□□ 0.75
Hdac9Q99N13 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Hdac9Q99N13 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.73■□□□□ 0.75
Hdac9Q99N13 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac9Q99N13 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac9Q99N13 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac9Q99N13 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac9Q99N13 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac9Q99N13 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac9Q99N13 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac9Q99N13 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hdac9Q99N13 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hdac9Q99N13 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac9Q99N13 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac9Q99N13 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac9Q99N13 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac9Q99N13 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac9Q99N13 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac9Q99N13 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.72■□□□□ 0.75
Hdac9Q99N13 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac9Q99N13 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac9Q99N13 Gm44454-201ENSMUST00000198541 138 ntBASIC19.72■□□□□ 0.75
Hdac9Q99N13 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.72■□□□□ 0.75
Hdac9Q99N13 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac9Q99N13 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac9Q99N13 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac9Q99N13 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.72■□□□□ 0.75
Hdac9Q99N13 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac9Q99N13 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac9Q99N13 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac9Q99N13 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac9Q99N13 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac9Q99N13 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hdac9Q99N13 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.71■□□□□ 0.75
Hdac9Q99N13 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Hdac9Q99N13 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac9Q99N13 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac9Q99N13 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Hdac9Q99N13 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac9Q99N13 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac9Q99N13 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac9Q99N13 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac9Q99N13 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac9Q99N13 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Hdac9Q99N13 Gm27867-201ENSMUST00000184778 125 ntBASIC19.7■□□□□ 0.74
Hdac9Q99N13 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac9Q99N13 Gm44430-201ENSMUST00000203376 995 ntBASIC19.7■□□□□ 0.74
Hdac9Q99N13 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.7■□□□□ 0.74
Hdac9Q99N13 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.7■□□□□ 0.74
Hdac9Q99N13 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hdac9Q99N13 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
Hdac9Q99N13 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms