Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col25a1Q99MQ5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Col25a1Q99MQ5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col25a1Q99MQ5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col25a1Q99MQ5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col25a1Q99MQ5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col25a1Q99MQ5 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Col25a1Q99MQ5 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Col25a1Q99MQ5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Col25a1Q99MQ5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Col25a1Q99MQ5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col25a1Q99MQ5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col25a1Q99MQ5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col25a1Q99MQ5 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Col25a1Q99MQ5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Col25a1Q99MQ5 Gm6089-201ENSMUST00000197666 938 ntBASIC17.39■□□□□ 0.37
Col25a1Q99MQ5 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col25a1Q99MQ5 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col25a1Q99MQ5 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Col25a1Q99MQ5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col25a1Q99MQ5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col25a1Q99MQ5 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.39■□□□□ 0.37
Col25a1Q99MQ5 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col25a1Q99MQ5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Col25a1Q99MQ5 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col25a1Q99MQ5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col25a1Q99MQ5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col25a1Q99MQ5 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col25a1Q99MQ5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 Gm15653-201ENSMUST00000119247 907 ntBASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 Gm15590-201ENSMUST00000078419 552 ntBASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col25a1Q99MQ5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 Gm11424-201ENSMUST00000121929 829 ntBASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col25a1Q99MQ5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms