Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Tlr3Q99MB1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tlr3Q99MB1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tlr3Q99MB1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tlr3Q99MB1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tlr3Q99MB1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tlr3Q99MB1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.05■□□□□ 0.48
Tlr3Q99MB1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tlr3Q99MB1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Gm2274-201ENSMUST00000184539 609 ntBASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Gm18959-201ENSMUST00000208954 655 ntBASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tlr3Q99MB1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tlr3Q99MB1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tlr3Q99MB1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Tlr3Q99MB1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tlr3Q99MB1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tlr3Q99MB1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tlr3Q99MB1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tlr3Q99MB1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tlr3Q99MB1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.02■□□□□ 0.48
Tlr3Q99MB1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tlr3Q99MB1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tlr3Q99MB1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tlr3Q99MB1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tlr3Q99MB1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tlr3Q99MB1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tlr3Q99MB1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Tlr3Q99MB1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Tlr3Q99MB1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Tlr3Q99MB1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Tlr3Q99MB1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Tlr3Q99MB1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms