Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scrt1Q99M85 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scrt1Q99M85 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scrt1Q99M85 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scrt1Q99M85 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scrt1Q99M85 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scrt1Q99M85 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scrt1Q99M85 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.72□□□□□ -0.05
Scrt1Q99M85 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scrt1Q99M85 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.72□□□□□ -0.05
Scrt1Q99M85 Gm37722-201ENSMUST00000193757 208 ntBASIC14.72□□□□□ -0.05
Scrt1Q99M85 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scrt1Q99M85 Il3ra-202ENSMUST00000223589 738 ntBASIC14.72□□□□□ -0.05
Scrt1Q99M85 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scrt1Q99M85 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Scrt1Q99M85 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Scrt1Q99M85 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scrt1Q99M85 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scrt1Q99M85 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scrt1Q99M85 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scrt1Q99M85 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scrt1Q99M85 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Gm8969-201ENSMUST00000199694 526 ntBASIC14.71□□□□□ -0.05
Scrt1Q99M85 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Birc2-201ENSMUST00000054878 378 ntBASIC14.71□□□□□ -0.05
Scrt1Q99M85 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.71□□□□□ -0.05
Scrt1Q99M85 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.71□□□□□ -0.05
Scrt1Q99M85 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scrt1Q99M85 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scrt1Q99M85 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Scrt1Q99M85 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scrt1Q99M85 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scrt1Q99M85 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Scrt1Q99M85 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scrt1Q99M85 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Gm13884-201ENSMUST00000118103 829 ntBASIC14.69□□□□□ -0.06
Scrt1Q99M85 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scrt1Q99M85 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scrt1Q99M85 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms