Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lysmd3Q99LE3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 Gm13186-201ENSMUST00000118031 316 ntBASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Lysmd3Q99LE3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Gm29518-201ENSMUST00000190858 372 ntBASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lysmd3Q99LE3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Gm17808-201ENSMUST00000200859 894 ntBASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Lysmd3Q99LE3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms