Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.9■□□□□ 0.46
Pcdha2Q91Y17 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Pcdha2Q91Y17 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha2Q91Y17 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha2Q91Y17 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha2Q91Y17 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha2Q91Y17 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Pcdha2Q91Y17 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha2Q91Y17 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha2Q91Y17 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha2Q91Y17 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Pcdha2Q91Y17 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha2Q91Y17 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Pcdha2Q91Y17 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.9■□□□□ 0.46
Pcdha2Q91Y17 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.9■□□□□ 0.46
Pcdha2Q91Y17 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha2Q91Y17 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha2Q91Y17 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha2Q91Y17 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
Pcdha2Q91Y17 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdha2Q91Y17 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdha2Q91Y17 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.89■□□□□ 0.45
Pcdha2Q91Y17 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha2Q91Y17 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha2Q91Y17 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha2Q91Y17 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha2Q91Y17 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha2Q91Y17 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha2Q91Y17 AA414768-201ENSMUST00000121924 1257 ntBASIC17.89■□□□□ 0.45
Pcdha2Q91Y17 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha2Q91Y17 Gm6345-202ENSMUST00000180900 204 ntBASIC17.89■□□□□ 0.45
Pcdha2Q91Y17 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha2Q91Y17 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.89■□□□□ 0.45
Pcdha2Q91Y17 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Pcdha2Q91Y17 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.89■□□□□ 0.45
Pcdha2Q91Y17 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.89■□□□□ 0.45
Pcdha2Q91Y17 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha2Q91Y17 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Gm29707-201ENSMUST00000196325 491 ntBASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha2Q91Y17 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdha2Q91Y17 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms