Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb22Q91XZ8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhb22Q91XZ8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb22Q91XZ8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb22Q91XZ8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb22Q91XZ8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb22Q91XZ8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb22Q91XZ8 Gm7977-201ENSMUST00000193787 748 ntBASIC19.62■□□□□ 0.73
Pcdhb22Q91XZ8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb22Q91XZ8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb22Q91XZ8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb22Q91XZ8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhb22Q91XZ8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb22Q91XZ8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb22Q91XZ8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb22Q91XZ8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb22Q91XZ8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Gm44450-201ENSMUST00000199528 114 ntBASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb22Q91XZ8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb22Q91XZ8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb22Q91XZ8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb22Q91XZ8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb22Q91XZ8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb22Q91XZ8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Pcdhb22Q91XZ8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb22Q91XZ8 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.59■□□□□ 0.73
Pcdhb22Q91XZ8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb22Q91XZ8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb22Q91XZ8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb22Q91XZ8 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Pcdhb22Q91XZ8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb22Q91XZ8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb22Q91XZ8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb22Q91XZ8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb22Q91XZ8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb22Q91XZ8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb22Q91XZ8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhb22Q91XZ8 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Pcdhb22Q91XZ8 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Pcdhb22Q91XZ8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb22Q91XZ8 Gm13216-201ENSMUST00000117145 591 ntBASIC19.58■□□□□ 0.72
Pcdhb22Q91XZ8 Gm11336-201ENSMUST00000118168 334 ntBASIC19.58■□□□□ 0.72
Pcdhb22Q91XZ8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb22Q91XZ8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb22Q91XZ8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb22Q91XZ8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb22Q91XZ8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb22Q91XZ8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pcdhb22Q91XZ8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pcdhb22Q91XZ8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhb22Q91XZ8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pcdhb22Q91XZ8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.58■□□□□ 0.72
Pcdhb22Q91XZ8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb22Q91XZ8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb22Q91XZ8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb22Q91XZ8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.57■□□□□ 0.72
Pcdhb22Q91XZ8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb22Q91XZ8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.57■□□□□ 0.72
Pcdhb22Q91XZ8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Pcdhb22Q91XZ8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb22Q91XZ8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb22Q91XZ8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhb22Q91XZ8 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms