Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Gm7791-201ENSMUST00000219066 539 ntBASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.41■□□□□ 0.22
Pcdhb8Q91XZ2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Dancr-204ENSMUST00000132389 2347 ntBASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Mir5122-201ENSMUST00000175004 89 ntBASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Gm27000-201ENSMUST00000182943 842 ntBASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Gm21814-202ENSMUST00000203277 873 ntBASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb8Q91XZ2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Gm13216-201ENSMUST00000117145 591 ntBASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb8Q91XZ2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb8Q91XZ2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb8Q91XZ2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms