Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Gm18195-201ENSMUST00000207604 706 ntBASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga6Q91XY2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga6Q91XY2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga6Q91XY2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga6Q91XY2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga6Q91XY2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga6Q91XY2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga6Q91XY2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhga6Q91XY2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Pcdhga6Q91XY2 Gm37722-201ENSMUST00000193757 208 ntBASIC16.71■□□□□ 0.27
Pcdhga6Q91XY2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga6Q91XY2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga6Q91XY2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga6Q91XY2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga6Q91XY2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhga6Q91XY2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Pcdhga6Q91XY2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga6Q91XY2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhga6Q91XY2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhga6Q91XY2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhga6Q91XY2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhga6Q91XY2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga6Q91XY2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga6Q91XY2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhga6Q91XY2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga6Q91XY2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga6Q91XY2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga6Q91XY2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga6Q91XY2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga6Q91XY2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.7■□□□□ 0.26
Pcdhga6Q91XY2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga6Q91XY2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga6Q91XY2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhga6Q91XY2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga6Q91XY2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhga6Q91XY2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Pcdhga6Q91XY2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhga6Q91XY2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga6Q91XY2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga6Q91XY2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga6Q91XY2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdhga6Q91XY2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga6Q91XY2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga6Q91XY2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdhga6Q91XY2 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.68■□□□□ 0.26
Pcdhga6Q91XY2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Pcdhga6Q91XY2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga6Q91XY2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdhga6Q91XY2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga6Q91XY2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga6Q91XY2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga6Q91XY2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga6Q91XY2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga6Q91XY2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga6Q91XY2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga6Q91XY2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhga6Q91XY2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga6Q91XY2 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.67■□□□□ 0.26
Pcdhga6Q91XY2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhga6Q91XY2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga6Q91XY2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga6Q91XY2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Pcdhga6Q91XY2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga6Q91XY2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga6Q91XY2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga6Q91XY2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhga6Q91XY2 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.67■□□□□ 0.26
Pcdhga6Q91XY2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms