Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trex1Q91XB0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.24■□□□□ 0.67
Trex1Q91XB0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.24■□□□□ 0.67
Trex1Q91XB0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trex1Q91XB0 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.24■□□□□ 0.67
Trex1Q91XB0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trex1Q91XB0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trex1Q91XB0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trex1Q91XB0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trex1Q91XB0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.24■□□□□ 0.67
Trex1Q91XB0 Gm13884-201ENSMUST00000118103 829 ntBASIC19.24■□□□□ 0.67
Trex1Q91XB0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.24■□□□□ 0.67
Trex1Q91XB0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.24■□□□□ 0.67
Trex1Q91XB0 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trex1Q91XB0 Mir8098-201ENSMUST00000184011 137 ntBASIC19.24■□□□□ 0.67
Trex1Q91XB0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trex1Q91XB0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trex1Q91XB0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trex1Q91XB0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trex1Q91XB0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trex1Q91XB0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trex1Q91XB0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trex1Q91XB0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trex1Q91XB0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trex1Q91XB0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trex1Q91XB0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trex1Q91XB0 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.23■□□□□ 0.67
Trex1Q91XB0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trex1Q91XB0 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.23■□□□□ 0.67
Trex1Q91XB0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trex1Q91XB0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC19.23■□□□□ 0.67
Trex1Q91XB0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trex1Q91XB0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trex1Q91XB0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trex1Q91XB0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trex1Q91XB0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trex1Q91XB0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trex1Q91XB0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trex1Q91XB0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trex1Q91XB0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.21■□□□□ 0.67
Trex1Q91XB0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trex1Q91XB0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trex1Q91XB0 Gm13312-201ENSMUST00000119631 718 ntBASIC19.21■□□□□ 0.67
Trex1Q91XB0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trex1Q91XB0 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trex1Q91XB0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trex1Q91XB0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trex1Q91XB0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trex1Q91XB0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trex1Q91XB0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trex1Q91XB0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trex1Q91XB0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trex1Q91XB0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trex1Q91XB0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trex1Q91XB0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trex1Q91XB0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trex1Q91XB0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trex1Q91XB0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trex1Q91XB0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.2■□□□□ 0.66
Trex1Q91XB0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trex1Q91XB0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Trex1Q91XB0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trex1Q91XB0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.2■□□□□ 0.66
Trex1Q91XB0 Gm10052-201ENSMUST00000168019 960 ntBASIC19.2■□□□□ 0.66
Trex1Q91XB0 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.2■□□□□ 0.66
Trex1Q91XB0 Gm7729-201ENSMUST00000050143 801 ntBASIC19.2■□□□□ 0.66
Trex1Q91XB0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.2■□□□□ 0.66
Trex1Q91XB0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trex1Q91XB0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trex1Q91XB0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Trex1Q91XB0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.2■□□□□ 0.66
Trex1Q91XB0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trex1Q91XB0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.2■□□□□ 0.66
Trex1Q91XB0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trex1Q91XB0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trex1Q91XB0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trex1Q91XB0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.19■□□□□ 0.66
Trex1Q91XB0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trex1Q91XB0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms