Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
TraipQ8VIG6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TraipQ8VIG6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TraipQ8VIG6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TraipQ8VIG6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TraipQ8VIG6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.87■□□□□ 0.45
TraipQ8VIG6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TraipQ8VIG6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TraipQ8VIG6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TraipQ8VIG6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TraipQ8VIG6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TraipQ8VIG6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TraipQ8VIG6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TraipQ8VIG6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.85■□□□□ 0.45
TraipQ8VIG6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TraipQ8VIG6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TraipQ8VIG6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.85■□□□□ 0.45
TraipQ8VIG6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.85■□□□□ 0.45
TraipQ8VIG6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.85■□□□□ 0.45
TraipQ8VIG6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.85■□□□□ 0.45
TraipQ8VIG6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TraipQ8VIG6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TraipQ8VIG6 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TraipQ8VIG6 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TraipQ8VIG6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.85■□□□□ 0.45
TraipQ8VIG6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TraipQ8VIG6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TraipQ8VIG6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TraipQ8VIG6 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.84■□□□□ 0.45
TraipQ8VIG6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TraipQ8VIG6 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TraipQ8VIG6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TraipQ8VIG6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TraipQ8VIG6 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
TraipQ8VIG6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TraipQ8VIG6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TraipQ8VIG6 Gm13312-201ENSMUST00000119631 718 ntBASIC17.84■□□□□ 0.45
TraipQ8VIG6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TraipQ8VIG6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.84■□□□□ 0.45
TraipQ8VIG6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TraipQ8VIG6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TraipQ8VIG6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.84■□□□□ 0.45
TraipQ8VIG6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TraipQ8VIG6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TraipQ8VIG6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TraipQ8VIG6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TraipQ8VIG6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.84■□□□□ 0.45
TraipQ8VIG6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TraipQ8VIG6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TraipQ8VIG6 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.83■□□□□ 0.45
TraipQ8VIG6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TraipQ8VIG6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TraipQ8VIG6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TraipQ8VIG6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.83■□□□□ 0.44
TraipQ8VIG6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
TraipQ8VIG6 Birc2-201ENSMUST00000054878 378 ntBASIC17.83■□□□□ 0.44
TraipQ8VIG6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TraipQ8VIG6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TraipQ8VIG6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.83■□□□□ 0.44
TraipQ8VIG6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TraipQ8VIG6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TraipQ8VIG6 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TraipQ8VIG6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TraipQ8VIG6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TraipQ8VIG6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TraipQ8VIG6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TraipQ8VIG6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TraipQ8VIG6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TraipQ8VIG6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TraipQ8VIG6 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.82■□□□□ 0.44
TraipQ8VIG6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TraipQ8VIG6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TraipQ8VIG6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TraipQ8VIG6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TraipQ8VIG6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.82■□□□□ 0.44
TraipQ8VIG6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TraipQ8VIG6 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.82■□□□□ 0.44
TraipQ8VIG6 Rarb-207ENSMUST00000225921 2756 ntBASIC17.82■□□□□ 0.44
TraipQ8VIG6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TraipQ8VIG6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TraipQ8VIG6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TraipQ8VIG6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms