Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh18Q8VHR0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh18Q8VHR0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh18Q8VHR0 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh18Q8VHR0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh18Q8VHR0 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.24■□□□□ 0.19
Pcdh18Q8VHR0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.24■□□□□ 0.19
Pcdh18Q8VHR0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.24■□□□□ 0.19
Pcdh18Q8VHR0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh18Q8VHR0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh18Q8VHR0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh18Q8VHR0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh18Q8VHR0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh18Q8VHR0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.24■□□□□ 0.19
Pcdh18Q8VHR0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh18Q8VHR0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdh18Q8VHR0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Gm10602-201ENSMUST00000098239 609 ntBASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdh18Q8VHR0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdh18Q8VHR0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh18Q8VHR0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh18Q8VHR0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh18Q8VHR0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh18Q8VHR0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh18Q8VHR0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh18Q8VHR0 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.21■□□□□ 0.19
Pcdh18Q8VHR0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh18Q8VHR0 Gm11927-201ENSMUST00000118472 759 ntBASIC16.21■□□□□ 0.19
Pcdh18Q8VHR0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh18Q8VHR0 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Pcdh18Q8VHR0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh18Q8VHR0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh18Q8VHR0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh18Q8VHR0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh18Q8VHR0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh18Q8VHR0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh18Q8VHR0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdh18Q8VHR0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdh18Q8VHR0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdh18Q8VHR0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdh18Q8VHR0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdh18Q8VHR0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.21■□□□□ 0.18
Pcdh18Q8VHR0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Gm10418-201ENSMUST00000100943 576 ntBASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Gm2559-201ENSMUST00000201323 363 ntBASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Gm29791-202ENSMUST00000207888 369 ntBASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdh18Q8VHR0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms