Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps4aQ8VEJ9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps4aQ8VEJ9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vps4aQ8VEJ9 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Gm21814-202ENSMUST00000203277 873 ntBASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4aQ8VEJ9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Gm43183-201ENSMUST00000200632 547 ntBASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vps4aQ8VEJ9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Gm13559-201ENSMUST00000120476 863 ntBASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.29■□□□□ 0.2
Vps4aQ8VEJ9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4aQ8VEJ9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms