Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Gm8097-201ENSMUST00000117903 829 ntBASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Gm13418-201ENSMUST00000119097 944 ntBASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lmcd1Q8VEE1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Gm18421-201ENSMUST00000204122 625 ntBASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lmcd1Q8VEE1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Gm15173-201ENSMUST00000122049 433 ntBASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Lmcd1Q8VEE1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 Gm44430-201ENSMUST00000203376 995 ntBASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lmcd1Q8VEE1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.85■□□□□ 0.45
Lmcd1Q8VEE1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms