Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Uhrf1Q8VDF2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Uhrf1Q8VDF2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Uhrf1Q8VDF2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Uhrf1Q8VDF2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Uhrf1Q8VDF2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Uhrf1Q8VDF2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.31■□□□□ 0.36
Uhrf1Q8VDF2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Uhrf1Q8VDF2 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.31■□□□□ 0.36
Uhrf1Q8VDF2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.31■□□□□ 0.36
Uhrf1Q8VDF2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Uhrf1Q8VDF2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.31■□□□□ 0.36
Uhrf1Q8VDF2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Uhrf1Q8VDF2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Uhrf1Q8VDF2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Uhrf1Q8VDF2 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.31■□□□□ 0.36
Uhrf1Q8VDF2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Uhrf1Q8VDF2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Uhrf1Q8VDF2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.29■□□□□ 0.36
Uhrf1Q8VDF2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Uhrf1Q8VDF2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Uhrf1Q8VDF2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Uhrf1Q8VDF2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Uhrf1Q8VDF2 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Uhrf1Q8VDF2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Uhrf1Q8VDF2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.28■□□□□ 0.36
Uhrf1Q8VDF2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.28■□□□□ 0.36
Uhrf1Q8VDF2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Uhrf1Q8VDF2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Uhrf1Q8VDF2 Gm10060-201ENSMUST00000212002 111 ntBASIC17.28■□□□□ 0.36
Uhrf1Q8VDF2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Uhrf1Q8VDF2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Uhrf1Q8VDF2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Uhrf1Q8VDF2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Uhrf1Q8VDF2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Uhrf1Q8VDF2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Uhrf1Q8VDF2 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.28■□□□□ 0.36
Uhrf1Q8VDF2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Uhrf1Q8VDF2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Uhrf1Q8VDF2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.27■□□□□ 0.36
Uhrf1Q8VDF2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.27■□□□□ 0.36
Uhrf1Q8VDF2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Uhrf1Q8VDF2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Uhrf1Q8VDF2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Uhrf1Q8VDF2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Uhrf1Q8VDF2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Uhrf1Q8VDF2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Uhrf1Q8VDF2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Uhrf1Q8VDF2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Uhrf1Q8VDF2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Uhrf1Q8VDF2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Uhrf1Q8VDF2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Uhrf1Q8VDF2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Uhrf1Q8VDF2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Uhrf1Q8VDF2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Uhrf1Q8VDF2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.26■□□□□ 0.35
Uhrf1Q8VDF2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Uhrf1Q8VDF2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Uhrf1Q8VDF2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Uhrf1Q8VDF2 Gm12350-201ENSMUST00000121208 462 ntBASIC17.26■□□□□ 0.35
Uhrf1Q8VDF2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms