Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Gm10566-201ENSMUST00000086739 996 ntBASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ndc1Q8VCB1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Gm14859-201ENSMUST00000117752 357 ntBASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Gm5587-201ENSMUST00000206270 674 ntBASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ndc1Q8VCB1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Gm9013-201ENSMUST00000132939 882 ntBASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Gm26039-201ENSMUST00000158152 144 ntBASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ndc1Q8VCB1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Ndc1Q8VCB1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms