Protein–RNA interactions for Protein: Q8VBS7

Vmn1r42, Vomeronasal type-1 receptor 42, mousemouse

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r42Q8VBS7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Vmn1r42Q8VBS7 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.27■□□□□ 0.04
Vmn1r42Q8VBS7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vmn1r42Q8VBS7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vmn1r42Q8VBS7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Vmn1r42Q8VBS7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vmn1r42Q8VBS7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vmn1r42Q8VBS7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vmn1r42Q8VBS7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vmn1r42Q8VBS7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Vmn1r42Q8VBS7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Gm6433-201ENSMUST00000118634 875 ntBASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vmn1r42Q8VBS7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Gm13559-201ENSMUST00000120476 863 ntBASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Gm37025-201ENSMUST00000195159 829 ntBASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Gm9987-201ENSMUST00000069768 567 ntBASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vmn1r42Q8VBS7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vmn1r42Q8VBS7 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.24■□□□□ 0.03
Vmn1r42Q8VBS7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vmn1r42Q8VBS7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vmn1r42Q8VBS7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vmn1r42Q8VBS7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vmn1r42Q8VBS7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vmn1r42Q8VBS7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.24■□□□□ 0.03
Vmn1r42Q8VBS7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vmn1r42Q8VBS7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vmn1r42Q8VBS7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vmn1r42Q8VBS7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vmn1r42Q8VBS7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vmn1r42Q8VBS7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vmn1r42Q8VBS7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Vmn1r42Q8VBS7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vmn1r42Q8VBS7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vmn1r42Q8VBS7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vmn1r42Q8VBS7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vmn1r42Q8VBS7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Vmn1r42Q8VBS7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vmn1r42Q8VBS7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.23■□□□□ 0.03
Vmn1r42Q8VBS7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Vmn1r42Q8VBS7 Gm7638-201ENSMUST00000121348 967 ntBASIC15.23■□□□□ 0.03
Vmn1r42Q8VBS7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.23■□□□□ 0.03
Vmn1r42Q8VBS7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Vmn1r42Q8VBS7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms