Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.76□□□□□ -0.21
Nup35Q8R4R6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nup35Q8R4R6 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nup35Q8R4R6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nup35Q8R4R6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup35Q8R4R6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Nup35Q8R4R6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nup35Q8R4R6 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.76□□□□□ -0.21
Nup35Q8R4R6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup35Q8R4R6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup35Q8R4R6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup35Q8R4R6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Gm5874-201ENSMUST00000096101 508 ntBASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nup35Q8R4R6 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nup35Q8R4R6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Gm5408-201ENSMUST00000197998 747 ntBASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nup35Q8R4R6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nup35Q8R4R6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms