Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.52■□□□□ 0.24
Chrna3Q8R4G9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.52■□□□□ 0.24
Chrna3Q8R4G9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna3Q8R4G9 Gm25016-201ENSMUST00000158399 131 ntBASIC16.52■□□□□ 0.24
Chrna3Q8R4G9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna3Q8R4G9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Chrna3Q8R4G9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna3Q8R4G9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Chrna3Q8R4G9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna3Q8R4G9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna3Q8R4G9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna3Q8R4G9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna3Q8R4G9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna3Q8R4G9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chrna3Q8R4G9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chrna3Q8R4G9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Gm11355-201ENSMUST00000121120 306 ntBASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Chrna3Q8R4G9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chrna3Q8R4G9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Gm9013-201ENSMUST00000132939 882 ntBASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Gm6345-202ENSMUST00000180900 204 ntBASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms