Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim29Q8R2Q0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim29Q8R2Q0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim29Q8R2Q0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim29Q8R2Q0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim29Q8R2Q0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Trim29Q8R2Q0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim29Q8R2Q0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.22■□□□□ 0.67
Trim29Q8R2Q0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim29Q8R2Q0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trim29Q8R2Q0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim29Q8R2Q0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim29Q8R2Q0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim29Q8R2Q0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim29Q8R2Q0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.22■□□□□ 0.67
Trim29Q8R2Q0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim29Q8R2Q0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 Gm27000-201ENSMUST00000182943 842 ntBASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim29Q8R2Q0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Trim29Q8R2Q0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim29Q8R2Q0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Trim29Q8R2Q0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim29Q8R2Q0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim29Q8R2Q0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim29Q8R2Q0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim29Q8R2Q0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim29Q8R2Q0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim29Q8R2Q0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.2■□□□□ 0.66
Trim29Q8R2Q0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim29Q8R2Q0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim29Q8R2Q0 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.2■□□□□ 0.66
Trim29Q8R2Q0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim29Q8R2Q0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trim29Q8R2Q0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim29Q8R2Q0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim29Q8R2Q0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.19■□□□□ 0.66
Trim29Q8R2Q0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim29Q8R2Q0 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.19■□□□□ 0.66
Trim29Q8R2Q0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim29Q8R2Q0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim29Q8R2Q0 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trim29Q8R2Q0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.19■□□□□ 0.66
Trim29Q8R2Q0 Gm37055-201ENSMUST00000191866 133 ntBASIC19.19■□□□□ 0.66
Trim29Q8R2Q0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim29Q8R2Q0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim29Q8R2Q0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim29Q8R2Q0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim29Q8R2Q0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trim29Q8R2Q0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim29Q8R2Q0 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim29Q8R2Q0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.18■□□□□ 0.66
Trim29Q8R2Q0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Trim29Q8R2Q0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim29Q8R2Q0 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.18■□□□□ 0.66
Trim29Q8R2Q0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.18■□□□□ 0.66
Trim29Q8R2Q0 Gm30025-201ENSMUST00000218555 728 ntBASIC19.18■□□□□ 0.66
Trim29Q8R2Q0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim29Q8R2Q0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim29Q8R2Q0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim29Q8R2Q0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trim29Q8R2Q0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim29Q8R2Q0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim29Q8R2Q0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim29Q8R2Q0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim29Q8R2Q0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim29Q8R2Q0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim29Q8R2Q0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Trim29Q8R2Q0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim29Q8R2Q0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim29Q8R2Q0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Trim29Q8R2Q0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC19.17■□□□□ 0.66
Trim29Q8R2Q0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.17■□□□□ 0.66
Trim29Q8R2Q0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim29Q8R2Q0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.17■□□□□ 0.66
Trim29Q8R2Q0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim29Q8R2Q0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trim29Q8R2Q0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim29Q8R2Q0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim29Q8R2Q0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trim29Q8R2Q0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim29Q8R2Q0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim29Q8R2Q0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trim29Q8R2Q0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms