Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rpp40Q8R1F9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpp40Q8R1F9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpp40Q8R1F9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpp40Q8R1F9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpp40Q8R1F9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.02■□□□□ 0.48
Rpp40Q8R1F9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpp40Q8R1F9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Rpp40Q8R1F9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpp40Q8R1F9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Rpp40Q8R1F9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.02■□□□□ 0.48
Rpp40Q8R1F9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rpp40Q8R1F9 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.02■□□□□ 0.48
Rpp40Q8R1F9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.02■□□□□ 0.48
Rpp40Q8R1F9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rpp40Q8R1F9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rpp40Q8R1F9 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.02■□□□□ 0.47
Rpp40Q8R1F9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rpp40Q8R1F9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.01■□□□□ 0.47
Rpp40Q8R1F9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpp40Q8R1F9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpp40Q8R1F9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpp40Q8R1F9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpp40Q8R1F9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpp40Q8R1F9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.01■□□□□ 0.47
Rpp40Q8R1F9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.01■□□□□ 0.47
Rpp40Q8R1F9 Gm44450-201ENSMUST00000199528 114 ntBASIC18.01■□□□□ 0.47
Rpp40Q8R1F9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.01■□□□□ 0.47
Rpp40Q8R1F9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Rpp40Q8R1F9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpp40Q8R1F9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpp40Q8R1F9 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.01■□□□□ 0.47
Rpp40Q8R1F9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rpp40Q8R1F9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.01■□□□□ 0.47
Rpp40Q8R1F9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Rpp40Q8R1F9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp40Q8R1F9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Mir770-201ENSMUST00000103252 94 ntBASIC18■□□□□ 0.47
Rpp40Q8R1F9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18■□□□□ 0.47
Rpp40Q8R1F9 AC107711.5-202ENSMUST00000226429 702 ntBASIC18■□□□□ 0.47
Rpp40Q8R1F9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rpp40Q8R1F9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Gm29518-201ENSMUST00000190858 372 ntBASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Gm17808-201ENSMUST00000200859 894 ntBASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Rpp40Q8R1F9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rpp40Q8R1F9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms