Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Shtn1Q8K2Q9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Shtn1Q8K2Q9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shtn1Q8K2Q9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Shtn1Q8K2Q9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Shtn1Q8K2Q9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shtn1Q8K2Q9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.8■□□□□ 0.76
Shtn1Q8K2Q9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Shtn1Q8K2Q9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shtn1Q8K2Q9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shtn1Q8K2Q9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.79■□□□□ 0.76
Shtn1Q8K2Q9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.79■□□□□ 0.76
Shtn1Q8K2Q9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Shtn1Q8K2Q9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shtn1Q8K2Q9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.79■□□□□ 0.76
Shtn1Q8K2Q9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.79■□□□□ 0.76
Shtn1Q8K2Q9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shtn1Q8K2Q9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shtn1Q8K2Q9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shtn1Q8K2Q9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shtn1Q8K2Q9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shtn1Q8K2Q9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shtn1Q8K2Q9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shtn1Q8K2Q9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shtn1Q8K2Q9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shtn1Q8K2Q9 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shtn1Q8K2Q9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.78■□□□□ 0.76
Shtn1Q8K2Q9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shtn1Q8K2Q9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shtn1Q8K2Q9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shtn1Q8K2Q9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Shtn1Q8K2Q9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.78■□□□□ 0.76
Shtn1Q8K2Q9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shtn1Q8K2Q9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shtn1Q8K2Q9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Shtn1Q8K2Q9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Shtn1Q8K2Q9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shtn1Q8K2Q9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shtn1Q8K2Q9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Shtn1Q8K2Q9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shtn1Q8K2Q9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shtn1Q8K2Q9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Shtn1Q8K2Q9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.77■□□□□ 0.76
Shtn1Q8K2Q9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shtn1Q8K2Q9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shtn1Q8K2Q9 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Shtn1Q8K2Q9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Shtn1Q8K2Q9 Gm44450-201ENSMUST00000199528 114 ntBASIC19.77■□□□□ 0.76
Shtn1Q8K2Q9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shtn1Q8K2Q9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shtn1Q8K2Q9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shtn1Q8K2Q9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shtn1Q8K2Q9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Shtn1Q8K2Q9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shtn1Q8K2Q9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shtn1Q8K2Q9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shtn1Q8K2Q9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shtn1Q8K2Q9 Gm12350-201ENSMUST00000121208 462 ntBASIC19.75■□□□□ 0.75
Shtn1Q8K2Q9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.75■□□□□ 0.75
Shtn1Q8K2Q9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shtn1Q8K2Q9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.75■□□□□ 0.75
Shtn1Q8K2Q9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shtn1Q8K2Q9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shtn1Q8K2Q9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shtn1Q8K2Q9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Shtn1Q8K2Q9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.75■□□□□ 0.75
Shtn1Q8K2Q9 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.75■□□□□ 0.75
Shtn1Q8K2Q9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Shtn1Q8K2Q9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shtn1Q8K2Q9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shtn1Q8K2Q9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shtn1Q8K2Q9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shtn1Q8K2Q9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Shtn1Q8K2Q9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Shtn1Q8K2Q9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shtn1Q8K2Q9 Gm5364-201ENSMUST00000216789 889 ntBASIC19.74■□□□□ 0.75
Shtn1Q8K2Q9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shtn1Q8K2Q9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shtn1Q8K2Q9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shtn1Q8K2Q9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms