Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cchcr1Q8K2I2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cchcr1Q8K2I2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cchcr1Q8K2I2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cchcr1Q8K2I2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cchcr1Q8K2I2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cchcr1Q8K2I2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cchcr1Q8K2I2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cchcr1Q8K2I2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cchcr1Q8K2I2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cchcr1Q8K2I2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cchcr1Q8K2I2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cchcr1Q8K2I2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cchcr1Q8K2I2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cchcr1Q8K2I2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 Odf3b-204ENSMUST00000227834 930 ntBASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cchcr1Q8K2I2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 Gm18958-201ENSMUST00000174258 762 ntBASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Cchcr1Q8K2I2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cchcr1Q8K2I2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cchcr1Q8K2I2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cchcr1Q8K2I2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cchcr1Q8K2I2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cchcr1Q8K2I2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Cchcr1Q8K2I2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cchcr1Q8K2I2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.83■□□□□ 0.77
Cchcr1Q8K2I2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cchcr1Q8K2I2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cchcr1Q8K2I2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.83■□□□□ 0.77
Cchcr1Q8K2I2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cchcr1Q8K2I2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cchcr1Q8K2I2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cchcr1Q8K2I2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cchcr1Q8K2I2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.83■□□□□ 0.76
Cchcr1Q8K2I2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cchcr1Q8K2I2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cchcr1Q8K2I2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cchcr1Q8K2I2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cchcr1Q8K2I2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cchcr1Q8K2I2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cchcr1Q8K2I2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cchcr1Q8K2I2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms