Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn1Q8K0T0 Gm10566-201ENSMUST00000086739 996 ntBASIC19.41■□□□□ 0.7
Rtn1Q8K0T0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rtn1Q8K0T0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn1Q8K0T0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn1Q8K0T0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn1Q8K0T0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Rtn1Q8K0T0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn1Q8K0T0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rtn1Q8K0T0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn1Q8K0T0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn1Q8K0T0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rtn1Q8K0T0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn1Q8K0T0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn1Q8K0T0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rtn1Q8K0T0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn1Q8K0T0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn1Q8K0T0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn1Q8K0T0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Rtn1Q8K0T0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn1Q8K0T0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn1Q8K0T0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn1Q8K0T0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.4■□□□□ 0.7
Rtn1Q8K0T0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn1Q8K0T0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn1Q8K0T0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Rtn1Q8K0T0 Actl10-202ENSMUST00000226583 1501 ntBASIC19.4■□□□□ 0.7
Rtn1Q8K0T0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rtn1Q8K0T0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Rtn1Q8K0T0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rtn1Q8K0T0 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rtn1Q8K0T0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn1Q8K0T0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn1Q8K0T0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn1Q8K0T0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rtn1Q8K0T0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn1Q8K0T0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn1Q8K0T0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn1Q8K0T0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rtn1Q8K0T0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rtn1Q8K0T0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn1Q8K0T0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn1Q8K0T0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Rtn1Q8K0T0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rtn1Q8K0T0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Gm13186-201ENSMUST00000118031 316 ntBASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Mir1668-201ENSMUST00000184114 107 ntBASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rtn1Q8K0T0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn1Q8K0T0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn1Q8K0T0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn1Q8K0T0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rtn1Q8K0T0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn1Q8K0T0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn1Q8K0T0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn1Q8K0T0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rtn1Q8K0T0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn1Q8K0T0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn1Q8K0T0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.37■□□□□ 0.69
Rtn1Q8K0T0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn1Q8K0T0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn1Q8K0T0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rtn1Q8K0T0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Gm10231-201ENSMUST00000181584 441 ntBASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Gm10175-202ENSMUST00000208752 441 ntBASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rtn1Q8K0T0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms