Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Depdc1aQ8CIG0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1aQ8CIG0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1aQ8CIG0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Depdc1aQ8CIG0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1aQ8CIG0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1aQ8CIG0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1aQ8CIG0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1aQ8CIG0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1aQ8CIG0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.92■□□□□ 0.62
Depdc1aQ8CIG0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.92■□□□□ 0.62
Depdc1aQ8CIG0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Depdc1aQ8CIG0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1aQ8CIG0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1aQ8CIG0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Depdc1aQ8CIG0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.92■□□□□ 0.62
Depdc1aQ8CIG0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.92■□□□□ 0.62
Depdc1aQ8CIG0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
Depdc1aQ8CIG0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1aQ8CIG0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1aQ8CIG0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1aQ8CIG0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.91■□□□□ 0.62
Depdc1aQ8CIG0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Depdc1aQ8CIG0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1aQ8CIG0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Depdc1aQ8CIG0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.91■□□□□ 0.62
Depdc1aQ8CIG0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1aQ8CIG0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Depdc1aQ8CIG0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Depdc1aQ8CIG0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1aQ8CIG0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1aQ8CIG0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1aQ8CIG0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Depdc1aQ8CIG0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1aQ8CIG0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Depdc1aQ8CIG0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1aQ8CIG0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1aQ8CIG0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.9■□□□□ 0.62
Depdc1aQ8CIG0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Depdc1aQ8CIG0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
Depdc1aQ8CIG0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.9■□□□□ 0.62
Depdc1aQ8CIG0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1aQ8CIG0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1aQ8CIG0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Depdc1aQ8CIG0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1aQ8CIG0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.9■□□□□ 0.62
Depdc1aQ8CIG0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1aQ8CIG0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1aQ8CIG0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1aQ8CIG0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1aQ8CIG0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Depdc1aQ8CIG0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Depdc1aQ8CIG0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Depdc1aQ8CIG0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.89■□□□□ 0.61
Depdc1aQ8CIG0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Depdc1aQ8CIG0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.89■□□□□ 0.61
Depdc1aQ8CIG0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Depdc1aQ8CIG0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Depdc1aQ8CIG0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Depdc1aQ8CIG0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.89■□□□□ 0.61
Depdc1aQ8CIG0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Depdc1aQ8CIG0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Depdc1aQ8CIG0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Depdc1aQ8CIG0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Depdc1aQ8CIG0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.89■□□□□ 0.61
Depdc1aQ8CIG0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Depdc1aQ8CIG0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.88■□□□□ 0.61
Depdc1aQ8CIG0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1aQ8CIG0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Depdc1aQ8CIG0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1aQ8CIG0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1aQ8CIG0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1aQ8CIG0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.88■□□□□ 0.61
Depdc1aQ8CIG0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Depdc1aQ8CIG0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.88■□□□□ 0.61
Depdc1aQ8CIG0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Depdc1aQ8CIG0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Depdc1aQ8CIG0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1aQ8CIG0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1aQ8CIG0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1aQ8CIG0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1aQ8CIG0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1aQ8CIG0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Depdc1aQ8CIG0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.87■□□□□ 0.61
Depdc1aQ8CIG0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.87■□□□□ 0.61
Depdc1aQ8CIG0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.87■□□□□ 0.61
Depdc1aQ8CIG0 Gm27741-201ENSMUST00000185060 237 ntBASIC18.87■□□□□ 0.61
Depdc1aQ8CIG0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.87■□□□□ 0.61
Depdc1aQ8CIG0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Depdc1aQ8CIG0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms