Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clip4Q8CI96 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Clip4Q8CI96 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Clip4Q8CI96 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Clip4Q8CI96 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.95■□□□□ 0.3
Clip4Q8CI96 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clip4Q8CI96 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.95■□□□□ 0.3
Clip4Q8CI96 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.95■□□□□ 0.3
Clip4Q8CI96 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clip4Q8CI96 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clip4Q8CI96 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.94■□□□□ 0.3
Clip4Q8CI96 Gm12085-201ENSMUST00000119263 940 ntBASIC16.94■□□□□ 0.3
Clip4Q8CI96 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.94■□□□□ 0.3
Clip4Q8CI96 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clip4Q8CI96 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Gm30025-201ENSMUST00000218555 728 ntBASIC16.94■□□□□ 0.3
Clip4Q8CI96 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clip4Q8CI96 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clip4Q8CI96 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Clip4Q8CI96 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clip4Q8CI96 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clip4Q8CI96 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clip4Q8CI96 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clip4Q8CI96 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clip4Q8CI96 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clip4Q8CI96 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clip4Q8CI96 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clip4Q8CI96 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clip4Q8CI96 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.92■□□□□ 0.3
Clip4Q8CI96 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.92■□□□□ 0.3
Clip4Q8CI96 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.92■□□□□ 0.3
Clip4Q8CI96 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clip4Q8CI96 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clip4Q8CI96 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clip4Q8CI96 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Clip4Q8CI96 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.92■□□□□ 0.3
Clip4Q8CI96 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Clip4Q8CI96 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clip4Q8CI96 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clip4Q8CI96 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clip4Q8CI96 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clip4Q8CI96 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clip4Q8CI96 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms