Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 Gm27321-201ENSMUST00000185021 205 ntBASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Zc3h3Q8CHP0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Zc3h3Q8CHP0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Zc3h3Q8CHP0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Gm43438-201ENSMUST00000198133 379 ntBASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Zc3h3Q8CHP0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Zc3h3Q8CHP0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Gm11025-201ENSMUST00000140773 466 ntBASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Mir8117-201ENSMUST00000184773 107 ntBASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms