Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Gm12527-201ENSMUST00000117967 564 ntBASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Gm10698-201ENSMUST00000182663 604 ntBASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox30Q8CGW4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox30Q8CGW4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Sox30Q8CGW4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox30Q8CGW4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.36■□□□□ 0.53
Sox30Q8CGW4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox30Q8CGW4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.36■□□□□ 0.53
Sox30Q8CGW4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Sox30Q8CGW4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox30Q8CGW4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Sox30Q8CGW4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox30Q8CGW4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox30Q8CGW4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sox30Q8CGW4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox30Q8CGW4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox30Q8CGW4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox30Q8CGW4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sox30Q8CGW4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox30Q8CGW4 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.35■□□□□ 0.53
Sox30Q8CGW4 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.35■□□□□ 0.53
Sox30Q8CGW4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox30Q8CGW4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox30Q8CGW4 Gm15378-201ENSMUST00000121894 207 ntBASIC18.35■□□□□ 0.53
Sox30Q8CGW4 Trmt13-210ENSMUST00000198454 880 ntBASIC18.35■□□□□ 0.53
Sox30Q8CGW4 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.35■□□□□ 0.53
Sox30Q8CGW4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sox30Q8CGW4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox30Q8CGW4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox30Q8CGW4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox30Q8CGW4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox30Q8CGW4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sox30Q8CGW4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms