Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.46■□□□□ 0.38
Rp1l1Q8CGM2 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.46■□□□□ 0.38
Rp1l1Q8CGM2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rp1l1Q8CGM2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rp1l1Q8CGM2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rp1l1Q8CGM2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rp1l1Q8CGM2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rp1l1Q8CGM2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rp1l1Q8CGM2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rp1l1Q8CGM2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rp1l1Q8CGM2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.45■□□□□ 0.38
Rp1l1Q8CGM2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rp1l1Q8CGM2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.45■□□□□ 0.38
Rp1l1Q8CGM2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rp1l1Q8CGM2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rp1l1Q8CGM2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.44■□□□□ 0.38
Rp1l1Q8CGM2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1l1Q8CGM2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1l1Q8CGM2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1l1Q8CGM2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1l1Q8CGM2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1l1Q8CGM2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rp1l1Q8CGM2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1l1Q8CGM2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rp1l1Q8CGM2 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.44■□□□□ 0.38
Rp1l1Q8CGM2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1l1Q8CGM2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.43■□□□□ 0.38
Rp1l1Q8CGM2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1l1Q8CGM2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1l1Q8CGM2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1l1Q8CGM2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1l1Q8CGM2 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1l1Q8CGM2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1l1Q8CGM2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1l1Q8CGM2 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.43■□□□□ 0.38
Rp1l1Q8CGM2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1l1Q8CGM2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1l1Q8CGM2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.43■□□□□ 0.38
Rp1l1Q8CGM2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.43■□□□□ 0.38
Rp1l1Q8CGM2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rp1l1Q8CGM2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rp1l1Q8CGM2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rp1l1Q8CGM2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rp1l1Q8CGM2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rp1l1Q8CGM2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rp1l1Q8CGM2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Rp1l1Q8CGM2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Rp1l1Q8CGM2 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.42■□□□□ 0.38
Rp1l1Q8CGM2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rp1l1Q8CGM2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rp1l1Q8CGM2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rp1l1Q8CGM2 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.42■□□□□ 0.38
Rp1l1Q8CGM2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rp1l1Q8CGM2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.41■□□□□ 0.38
Rp1l1Q8CGM2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1l1Q8CGM2 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1l1Q8CGM2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1l1Q8CGM2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1l1Q8CGM2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1l1Q8CGM2 Gm5682-201ENSMUST00000173402 505 ntBASIC17.41■□□□□ 0.38
Rp1l1Q8CGM2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.41■□□□□ 0.38
Rp1l1Q8CGM2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1l1Q8CGM2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rp1l1Q8CGM2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1l1Q8CGM2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1l1Q8CGM2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rp1l1Q8CGM2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rp1l1Q8CGM2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.4■□□□□ 0.38
Rp1l1Q8CGM2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rp1l1Q8CGM2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rp1l1Q8CGM2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rp1l1Q8CGM2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rp1l1Q8CGM2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rp1l1Q8CGM2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rp1l1Q8CGM2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.4■□□□□ 0.38
Rp1l1Q8CGM2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.4■□□□□ 0.38
Rp1l1Q8CGM2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rp1l1Q8CGM2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rp1l1Q8CGM2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rp1l1Q8CGM2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rp1l1Q8CGM2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rp1l1Q8CGM2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rp1l1Q8CGM2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rp1l1Q8CGM2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.39■□□□□ 0.38
Rp1l1Q8CGM2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.39■□□□□ 0.38
Rp1l1Q8CGM2 Mir3113-201ENSMUST00000175478 76 ntBASIC17.39■□□□□ 0.38
Rp1l1Q8CGM2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.39■□□□□ 0.38
Rp1l1Q8CGM2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.39■□□□□ 0.38
Rp1l1Q8CGM2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Rp1l1Q8CGM2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Rp1l1Q8CGM2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rp1l1Q8CGM2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rp1l1Q8CGM2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rp1l1Q8CGM2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rp1l1Q8CGM2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rp1l1Q8CGM2 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.39■□□□□ 0.37
Rp1l1Q8CGM2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
Rp1l1Q8CGM2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Rp1l1Q8CGM2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rp1l1Q8CGM2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms