Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Smc5Q8CG46 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc5Q8CG46 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smc5Q8CG46 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc5Q8CG46 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc5Q8CG46 CT010478.1-201ENSMUST00000220747 2787 ntBASIC20.81■□□□□ 0.92
Smc5Q8CG46 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.81■□□□□ 0.92
Smc5Q8CG46 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc5Q8CG46 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc5Q8CG46 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc5Q8CG46 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.81■□□□□ 0.92
Smc5Q8CG46 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Smc5Q8CG46 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc5Q8CG46 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Smc5Q8CG46 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc5Q8CG46 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc5Q8CG46 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smc5Q8CG46 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smc5Q8CG46 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc5Q8CG46 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.8■□□□□ 0.92
Smc5Q8CG46 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.8■□□□□ 0.92
Smc5Q8CG46 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.8■□□□□ 0.92
Smc5Q8CG46 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Smc5Q8CG46 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.79■□□□□ 0.92
Smc5Q8CG46 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Gm12085-201ENSMUST00000119263 940 ntBASIC20.79■□□□□ 0.92
Smc5Q8CG46 Gm15378-201ENSMUST00000121894 207 ntBASIC20.79■□□□□ 0.92
Smc5Q8CG46 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Gm38027-201ENSMUST00000192315 235 ntBASIC20.79■□□□□ 0.92
Smc5Q8CG46 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc5Q8CG46 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc5Q8CG46 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc5Q8CG46 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc5Q8CG46 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc5Q8CG46 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC20.78■□□□□ 0.92
Smc5Q8CG46 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smc5Q8CG46 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc5Q8CG46 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.78■□□□□ 0.92
Smc5Q8CG46 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smc5Q8CG46 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc5Q8CG46 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.78■□□□□ 0.92
Smc5Q8CG46 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smc5Q8CG46 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Smc5Q8CG46 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc5Q8CG46 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc5Q8CG46 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.78■□□□□ 0.92
Smc5Q8CG46 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc5Q8CG46 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc5Q8CG46 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smc5Q8CG46 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc5Q8CG46 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.77■□□□□ 0.92
Smc5Q8CG46 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc5Q8CG46 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc5Q8CG46 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.77■□□□□ 0.92
Smc5Q8CG46 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC20.77■□□□□ 0.92
Smc5Q8CG46 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc5Q8CG46 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc5Q8CG46 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smc5Q8CG46 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Smc5Q8CG46 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc5Q8CG46 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc5Q8CG46 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc5Q8CG46 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Smc5Q8CG46 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Smc5Q8CG46 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms