Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim52Q8CDV4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim52Q8CDV4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim52Q8CDV4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.75■□□□□ 0.91
Trim52Q8CDV4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim52Q8CDV4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim52Q8CDV4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC20.75■□□□□ 0.91
Trim52Q8CDV4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim52Q8CDV4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.75■□□□□ 0.91
Trim52Q8CDV4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim52Q8CDV4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim52Q8CDV4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Trim52Q8CDV4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim52Q8CDV4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.75■□□□□ 0.91
Trim52Q8CDV4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim52Q8CDV4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim52Q8CDV4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim52Q8CDV4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim52Q8CDV4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim52Q8CDV4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim52Q8CDV4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim52Q8CDV4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.74■□□□□ 0.91
Trim52Q8CDV4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim52Q8CDV4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim52Q8CDV4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim52Q8CDV4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.74■□□□□ 0.91
Trim52Q8CDV4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.74■□□□□ 0.91
Trim52Q8CDV4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.74■□□□□ 0.91
Trim52Q8CDV4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.74■□□□□ 0.91
Trim52Q8CDV4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim52Q8CDV4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Trim52Q8CDV4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim52Q8CDV4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim52Q8CDV4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Trim52Q8CDV4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim52Q8CDV4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.73■□□□□ 0.91
Trim52Q8CDV4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim52Q8CDV4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim52Q8CDV4 Gm12644-201ENSMUST00000119935 606 ntBASIC20.73■□□□□ 0.91
Trim52Q8CDV4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim52Q8CDV4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.73■□□□□ 0.91
Trim52Q8CDV4 AC159301.1-201ENSMUST00000225130 1182 ntBASIC20.73■□□□□ 0.91
Trim52Q8CDV4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim52Q8CDV4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim52Q8CDV4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Trim52Q8CDV4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim52Q8CDV4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Trim52Q8CDV4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim52Q8CDV4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim52Q8CDV4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Trim52Q8CDV4 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim52Q8CDV4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Trim52Q8CDV4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim52Q8CDV4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
Trim52Q8CDV4 Gm44454-201ENSMUST00000198541 138 ntBASIC20.71■□□□□ 0.91
Trim52Q8CDV4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim52Q8CDV4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim52Q8CDV4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim52Q8CDV4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim52Q8CDV4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim52Q8CDV4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.7■□□□□ 0.9
Trim52Q8CDV4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim52Q8CDV4 Gm15165-201ENSMUST00000118140 502 ntBASIC20.7■□□□□ 0.9
Trim52Q8CDV4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim52Q8CDV4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim52Q8CDV4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.7■□□□□ 0.9
Trim52Q8CDV4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.7■□□□□ 0.9
Trim52Q8CDV4 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim52Q8CDV4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.7■□□□□ 0.9
Trim52Q8CDV4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim52Q8CDV4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim52Q8CDV4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim52Q8CDV4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim52Q8CDV4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim52Q8CDV4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim52Q8CDV4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim52Q8CDV4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim52Q8CDV4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim52Q8CDV4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim52Q8CDV4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Trim52Q8CDV4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim52Q8CDV4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim52Q8CDV4 Gm27867-201ENSMUST00000184778 125 ntBASIC20.69■□□□□ 0.9
Trim52Q8CDV4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim52Q8CDV4 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.69■□□□□ 0.9
Trim52Q8CDV4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim52Q8CDV4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim52Q8CDV4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.69■□□□□ 0.9
Trim52Q8CDV4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim52Q8CDV4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim52Q8CDV4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.69■□□□□ 0.9
Trim52Q8CDV4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trim52Q8CDV4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Trim52Q8CDV4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim52Q8CDV4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms