Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.41■□□□□ 0.54
Prpf31Q8CCF0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Prpf31Q8CCF0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf31Q8CCF0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Prpf31Q8CCF0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf31Q8CCF0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prpf31Q8CCF0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Prpf31Q8CCF0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.39■□□□□ 0.54
Prpf31Q8CCF0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
Prpf31Q8CCF0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf31Q8CCF0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.39■□□□□ 0.53
Prpf31Q8CCF0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf31Q8CCF0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf31Q8CCF0 Mir770-201ENSMUST00000103252 94 ntBASIC18.39■□□□□ 0.53
Prpf31Q8CCF0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf31Q8CCF0 Gm14859-201ENSMUST00000117752 357 ntBASIC18.39■□□□□ 0.53
Prpf31Q8CCF0 Gm7284-201ENSMUST00000131667 944 ntBASIC18.39■□□□□ 0.53
Prpf31Q8CCF0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf31Q8CCF0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf31Q8CCF0 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf31Q8CCF0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf31Q8CCF0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf31Q8CCF0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prpf31Q8CCF0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf31Q8CCF0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf31Q8CCF0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf31Q8CCF0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf31Q8CCF0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf31Q8CCF0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf31Q8CCF0 Gm11336-201ENSMUST00000118168 334 ntBASIC18.38■□□□□ 0.53
Prpf31Q8CCF0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf31Q8CCF0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf31Q8CCF0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf31Q8CCF0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf31Q8CCF0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf31Q8CCF0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Prpf31Q8CCF0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf31Q8CCF0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf31Q8CCF0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf31Q8CCF0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf31Q8CCF0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.38■□□□□ 0.53
Prpf31Q8CCF0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf31Q8CCF0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf31Q8CCF0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf31Q8CCF0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf31Q8CCF0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf31Q8CCF0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf31Q8CCF0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf31Q8CCF0 Gm11950-201ENSMUST00000121615 838 ntBASIC18.37■□□□□ 0.53
Prpf31Q8CCF0 Gm6623-201ENSMUST00000173570 544 ntBASIC18.37■□□□□ 0.53
Prpf31Q8CCF0 Gm27704-201ENSMUST00000185094 107 ntBASIC18.37■□□□□ 0.53
Prpf31Q8CCF0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.37■□□□□ 0.53
Prpf31Q8CCF0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf31Q8CCF0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf31Q8CCF0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf31Q8CCF0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Prpf31Q8CCF0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf31Q8CCF0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf31Q8CCF0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf31Q8CCF0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Prpf31Q8CCF0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf31Q8CCF0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf31Q8CCF0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf31Q8CCF0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf31Q8CCF0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.36■□□□□ 0.53
Prpf31Q8CCF0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.36■□□□□ 0.53
Prpf31Q8CCF0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf31Q8CCF0 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Prpf31Q8CCF0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf31Q8CCF0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf31Q8CCF0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf31Q8CCF0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf31Q8CCF0 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf31Q8CCF0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf31Q8CCF0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Prpf31Q8CCF0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf31Q8CCF0 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms