Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.28■□□□□ 0.2
SynpoQ8CC35 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SynpoQ8CC35 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SynpoQ8CC35 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SynpoQ8CC35 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SynpoQ8CC35 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SynpoQ8CC35 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SynpoQ8CC35 Gm2274-201ENSMUST00000184539 609 ntBASIC16.27■□□□□ 0.2
SynpoQ8CC35 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SynpoQ8CC35 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SynpoQ8CC35 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SynpoQ8CC35 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SynpoQ8CC35 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SynpoQ8CC35 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.26■□□□□ 0.19
SynpoQ8CC35 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.26■□□□□ 0.19
SynpoQ8CC35 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SynpoQ8CC35 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SynpoQ8CC35 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SynpoQ8CC35 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.25■□□□□ 0.19
SynpoQ8CC35 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Gm45058-201ENSMUST00000205810 766 ntBASIC16.25■□□□□ 0.19
SynpoQ8CC35 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SynpoQ8CC35 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SynpoQ8CC35 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Gm6659-201ENSMUST00000174752 547 ntBASIC16.24■□□□□ 0.19
SynpoQ8CC35 Mir5130-201ENSMUST00000175160 84 ntBASIC16.24■□□□□ 0.19
SynpoQ8CC35 Mir8112-201ENSMUST00000184382 131 ntBASIC16.24■□□□□ 0.19
SynpoQ8CC35 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Gm29791-202ENSMUST00000207888 369 ntBASIC16.24■□□□□ 0.19
SynpoQ8CC35 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SynpoQ8CC35 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms