Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Slc46a2Q8CA03 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a2Q8CA03 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a2Q8CA03 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a2Q8CA03 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a2Q8CA03 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a2Q8CA03 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a2Q8CA03 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a2Q8CA03 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Slc46a2Q8CA03 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a2Q8CA03 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a2Q8CA03 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Slc46a2Q8CA03 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a2Q8CA03 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Slc46a2Q8CA03 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a2Q8CA03 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Slc46a2Q8CA03 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a2Q8CA03 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Slc46a2Q8CA03 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 Gm4968-201ENSMUST00000071458 858 ntBASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a2Q8CA03 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Slc46a2Q8CA03 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Slc46a2Q8CA03 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Gm4974-201ENSMUST00000209974 875 ntBASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a2Q8CA03 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Slc46a2Q8CA03 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms