Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Uba3Q8C878 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Uba3Q8C878 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Uba3Q8C878 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uba3Q8C878 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Uba3Q8C878 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uba3Q8C878 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Uba3Q8C878 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uba3Q8C878 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uba3Q8C878 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uba3Q8C878 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Uba3Q8C878 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Uba3Q8C878 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uba3Q8C878 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.71■□□□□ 0.43
Uba3Q8C878 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Uba3Q8C878 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Uba3Q8C878 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Uba3Q8C878 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uba3Q8C878 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Uba3Q8C878 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.71■□□□□ 0.43
Uba3Q8C878 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Uba3Q8C878 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uba3Q8C878 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Uba3Q8C878 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Uba3Q8C878 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Uba3Q8C878 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Uba3Q8C878 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Uba3Q8C878 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Uba3Q8C878 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Uba3Q8C878 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.7■□□□□ 0.42
Uba3Q8C878 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Uba3Q8C878 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Uba3Q8C878 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Uba3Q8C878 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Uba3Q8C878 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Uba3Q8C878 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
Uba3Q8C878 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Uba3Q8C878 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Uba3Q8C878 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Uba3Q8C878 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Uba3Q8C878 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Uba3Q8C878 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Uba3Q8C878 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uba3Q8C878 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uba3Q8C878 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uba3Q8C878 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Uba3Q8C878 Actl10-202ENSMUST00000226583 1501 ntBASIC17.69■□□□□ 0.42
Uba3Q8C878 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uba3Q8C878 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.69■□□□□ 0.42
Uba3Q8C878 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Uba3Q8C878 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uba3Q8C878 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.69■□□□□ 0.42
Uba3Q8C878 Gm22697-201ENSMUST00000175194 63 ntBASIC17.69■□□□□ 0.42
Uba3Q8C878 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Uba3Q8C878 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uba3Q8C878 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uba3Q8C878 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uba3Q8C878 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uba3Q8C878 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.69■□□□□ 0.42
Uba3Q8C878 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.69■□□□□ 0.42
Uba3Q8C878 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uba3Q8C878 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Uba3Q8C878 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Uba3Q8C878 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.68■□□□□ 0.42
Uba3Q8C878 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Uba3Q8C878 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.68■□□□□ 0.42
Uba3Q8C878 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Uba3Q8C878 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.68■□□□□ 0.42
Uba3Q8C878 Gm18032-201ENSMUST00000222541 538 ntBASIC17.68■□□□□ 0.42
Uba3Q8C878 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Uba3Q8C878 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Uba3Q8C878 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uba3Q8C878 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uba3Q8C878 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uba3Q8C878 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uba3Q8C878 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uba3Q8C878 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.67■□□□□ 0.42
Uba3Q8C878 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Uba3Q8C878 Mir1668-201ENSMUST00000184114 107 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms