Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx6Q8C7R7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx6Q8C7R7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx6Q8C7R7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx6Q8C7R7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.12■□□□□ 0.33
Rfx6Q8C7R7 Gm24841-201ENSMUST00000158676 357 ntBASIC17.12■□□□□ 0.33
Rfx6Q8C7R7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx6Q8C7R7 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx6Q8C7R7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx6Q8C7R7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx6Q8C7R7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rfx6Q8C7R7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx6Q8C7R7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx6Q8C7R7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.12■□□□□ 0.33
Rfx6Q8C7R7 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx6Q8C7R7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfx6Q8C7R7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rfx6Q8C7R7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfx6Q8C7R7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Rfx6Q8C7R7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 Gm20049-201ENSMUST00000219950 730 ntBASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rfx6Q8C7R7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx6Q8C7R7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx6Q8C7R7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx6Q8C7R7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms