Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc60Q8C4J0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.46■■□□□ 1.03
Ccdc60Q8C4J0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.46■■□□□ 1.03
Ccdc60Q8C4J0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Ccdc60Q8C4J0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC21.46■■□□□ 1.03
Ccdc60Q8C4J0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Ccdc60Q8C4J0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc60Q8C4J0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc60Q8C4J0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21.46■■□□□ 1.03
Ccdc60Q8C4J0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc60Q8C4J0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc60Q8C4J0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ccdc60Q8C4J0 Gm7292-201ENSMUST00000194706 2527 ntBASIC21.46■■□□□ 1.03
Ccdc60Q8C4J0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Ccdc60Q8C4J0 Gm45203-201ENSMUST00000206384 1831 ntBASIC21.45■■□□□ 1.03
Ccdc60Q8C4J0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Ccdc60Q8C4J0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC21.45■■□□□ 1.02
Ccdc60Q8C4J0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Ccdc60Q8C4J0 Gm22697-201ENSMUST00000175194 63 ntBASIC21.45■■□□□ 1.02
Ccdc60Q8C4J0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc60Q8C4J0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc60Q8C4J0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc60Q8C4J0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc60Q8C4J0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc60Q8C4J0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc60Q8C4J0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc60Q8C4J0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc60Q8C4J0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc60Q8C4J0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc60Q8C4J0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ccdc60Q8C4J0 Phf7-203ENSMUST00000226565 1971 ntBASIC21.45■■□□□ 1.02
Ccdc60Q8C4J0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Ccdc60Q8C4J0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
Ccdc60Q8C4J0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC21.44■■□□□ 1.02
Ccdc60Q8C4J0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc60Q8C4J0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc60Q8C4J0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc60Q8C4J0 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc60Q8C4J0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.44■■□□□ 1.02
Ccdc60Q8C4J0 Gm13186-201ENSMUST00000118031 316 ntBASIC21.44■■□□□ 1.02
Ccdc60Q8C4J0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc60Q8C4J0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc60Q8C4J0 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc60Q8C4J0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc60Q8C4J0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc60Q8C4J0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ccdc60Q8C4J0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Ccdc60Q8C4J0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc60Q8C4J0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc60Q8C4J0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Ccdc60Q8C4J0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc60Q8C4J0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc60Q8C4J0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc60Q8C4J0 Gm18101-201ENSMUST00000215769 548 ntBASIC21.42■■□□□ 1.02
Ccdc60Q8C4J0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc60Q8C4J0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc60Q8C4J0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc60Q8C4J0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc60Q8C4J0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
Ccdc60Q8C4J0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc60Q8C4J0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc60Q8C4J0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc60Q8C4J0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc60Q8C4J0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Ccdc60Q8C4J0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Ccdc60Q8C4J0 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc60Q8C4J0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Ccdc60Q8C4J0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc60Q8C4J0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc60Q8C4J0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc60Q8C4J0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc60Q8C4J0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC21.41■■□□□ 1.02
Ccdc60Q8C4J0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc60Q8C4J0 Gm26039-201ENSMUST00000158152 144 ntBASIC21.41■■□□□ 1.02
Ccdc60Q8C4J0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc60Q8C4J0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
Ccdc60Q8C4J0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc60Q8C4J0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc60Q8C4J0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc60Q8C4J0 Gm6190-201ENSMUST00000220683 1374 ntBASIC21.4■■□□□ 1.02
Ccdc60Q8C4J0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc60Q8C4J0 Gm9954-202ENSMUST00000198686 4725 ntBASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms