Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim35Q8C006 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim35Q8C006 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim35Q8C006 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim35Q8C006 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.44■□□□□ 0.38
Trim35Q8C006 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.44■□□□□ 0.38
Trim35Q8C006 Gm38280-201ENSMUST00000192610 158 ntBASIC17.44■□□□□ 0.38
Trim35Q8C006 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim35Q8C006 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim35Q8C006 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim35Q8C006 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim35Q8C006 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim35Q8C006 Gm26226-201ENSMUST00000082509 116 ntBASIC17.44■□□□□ 0.38
Trim35Q8C006 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim35Q8C006 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim35Q8C006 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim35Q8C006 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim35Q8C006 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim35Q8C006 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim35Q8C006 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.43■□□□□ 0.38
Trim35Q8C006 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.43■□□□□ 0.38
Trim35Q8C006 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim35Q8C006 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim35Q8C006 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Trim35Q8C006 Gm4732-201ENSMUST00000118778 473 ntBASIC17.43■□□□□ 0.38
Trim35Q8C006 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC17.43■□□□□ 0.38
Trim35Q8C006 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim35Q8C006 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC17.43■□□□□ 0.38
Trim35Q8C006 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim35Q8C006 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim35Q8C006 AC163664.1-201ENSMUST00000226251 1248 ntBASIC17.43■□□□□ 0.38
Trim35Q8C006 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim35Q8C006 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim35Q8C006 Mtag2-201ENSMUST00000058665 714 ntBASIC17.43■□□□□ 0.38
Trim35Q8C006 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trim35Q8C006 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim35Q8C006 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim35Q8C006 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim35Q8C006 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.42■□□□□ 0.38
Trim35Q8C006 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim35Q8C006 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.42■□□□□ 0.38
Trim35Q8C006 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim35Q8C006 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trim35Q8C006 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.42■□□□□ 0.38
Trim35Q8C006 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim35Q8C006 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.42■□□□□ 0.38
Trim35Q8C006 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trim35Q8C006 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim35Q8C006 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trim35Q8C006 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC17.42■□□□□ 0.38
Trim35Q8C006 Gm14791-201ENSMUST00000119061 1166 ntBASIC17.42■□□□□ 0.38
Trim35Q8C006 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim35Q8C006 AC153968.2-201ENSMUST00000215579 1140 ntBASIC17.42■□□□□ 0.38
Trim35Q8C006 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim35Q8C006 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim35Q8C006 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim35Q8C006 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim35Q8C006 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim35Q8C006 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trim35Q8C006 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim35Q8C006 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 V1rg10-201ENSMUST00000183378 937 ntBASIC17.41■□□□□ 0.38
Trim35Q8C006 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC17.41■□□□□ 0.38
Trim35Q8C006 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.41■□□□□ 0.38
Trim35Q8C006 AC124569.4-201ENSMUST00000223830 1220 ntBASIC17.41■□□□□ 0.38
Trim35Q8C006 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim35Q8C006 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim35Q8C006 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trim35Q8C006 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Trim35Q8C006 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim35Q8C006 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim35Q8C006 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim35Q8C006 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim35Q8C006 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim35Q8C006 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim35Q8C006 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim35Q8C006 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim35Q8C006 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.4■□□□□ 0.38
Trim35Q8C006 Gm37234-201ENSMUST00000193259 1441 ntBASIC17.4■□□□□ 0.38
Trim35Q8C006 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim35Q8C006 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim35Q8C006 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms