Protein–RNA interactions for Protein: Q8BXL9

Iffo1, Intermediate filament family orphan 1, mousemouse

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Iffo1Q8BXL9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Iffo1Q8BXL9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Iffo1Q8BXL9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Iffo1Q8BXL9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Iffo1Q8BXL9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Iffo1Q8BXL9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Iffo1Q8BXL9 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.37■□□□□ 0.37
Iffo1Q8BXL9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Iffo1Q8BXL9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Iffo1Q8BXL9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Iffo1Q8BXL9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Iffo1Q8BXL9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Iffo1Q8BXL9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Iffo1Q8BXL9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Iffo1Q8BXL9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.36■□□□□ 0.37
Iffo1Q8BXL9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Iffo1Q8BXL9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Iffo1Q8BXL9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Iffo1Q8BXL9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Iffo1Q8BXL9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Iffo1Q8BXL9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Iffo1Q8BXL9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Iffo1Q8BXL9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.36■□□□□ 0.37
Iffo1Q8BXL9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Iffo1Q8BXL9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.36■□□□□ 0.37
Iffo1Q8BXL9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Iffo1Q8BXL9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Iffo1Q8BXL9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Iffo1Q8BXL9 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Iffo1Q8BXL9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Iffo1Q8BXL9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Iffo1Q8BXL9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Iffo1Q8BXL9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Iffo1Q8BXL9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.37
Iffo1Q8BXL9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.33■□□□□ 0.37
Iffo1Q8BXL9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Iffo1Q8BXL9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.33■□□□□ 0.36
Iffo1Q8BXL9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.33■□□□□ 0.36
Iffo1Q8BXL9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Iffo1Q8BXL9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Iffo1Q8BXL9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.33■□□□□ 0.36
Iffo1Q8BXL9 Gm42778-201ENSMUST00000199644 553 ntBASIC17.33■□□□□ 0.36
Iffo1Q8BXL9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.33■□□□□ 0.36
Iffo1Q8BXL9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Iffo1Q8BXL9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Iffo1Q8BXL9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Iffo1Q8BXL9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Iffo1Q8BXL9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Iffo1Q8BXL9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Iffo1Q8BXL9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Iffo1Q8BXL9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Iffo1Q8BXL9 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.33■□□□□ 0.36
Iffo1Q8BXL9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Iffo1Q8BXL9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Iffo1Q8BXL9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Iffo1Q8BXL9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Iffo1Q8BXL9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Iffo1Q8BXL9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms